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Cluster: BackhedF_2015_ERR525721_bin.17_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525721_bin.17_k119_7335 BackhedF_2015_ERR525721_bin.17_k119_7335_2 172 1932 - 4.A.3.1.1
CAZyme BackhedF_2015_ERR525721_bin.17_k119_7335 BackhedF_2015_ERR525721_bin.17_k119_7335_3 2108 3550 - GH1
TF BackhedF_2015_ERR525721_bin.17_k119_7335 BackhedF_2015_ERR525721_bin.17_k119_7335_4 3892 4929 + LacI
CAZyme BackhedF_2015_ERR525721_bin.17_k119_7335 BackhedF_2015_ERR525721_bin.17_k119_7335_5 5197 6636 - GH1
TC BackhedF_2015_ERR525721_bin.17_k119_7335 BackhedF_2015_ERR525721_bin.17_k119_7335_6 6703 8478 - 4.A.3.1.1
TF BackhedF_2015_ERR525721_bin.17_k119_7335 BackhedF_2015_ERR525721_bin.17_k119_7335_7 8806 9840 + LacI
TC BackhedF_2015_ERR525721_bin.17_k119_7335 BackhedF_2015_ERR525721_bin.17_k119_7335_8 10055 10393 + 4.A.3.1.2
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_7335_2
Type: TC
Location: 172 - 1932 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_7335_3
Type: CAZyme
Location: 2108 - 3550 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_7335_4
Type: TF
Location: 3892 - 4929 (+)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_7335_5
Type: CAZyme
Location: 5197 - 6636 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_7335_6
Type: TC
Location: 6703 - 8478 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_7335_7
Type: TF
Location: 8806 - 9840 (+)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_7335_8
Type: TC
Location: 10055 - 10393 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525721_bin.17_k119_7335_4 vegetarian > omnivore 1.04241 0.03761

🧭 Explore Read Mapping of CGC

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