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Cluster: BackhedF_2015_ERR525721_bin.17_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525721_bin.17_k119_2618 BackhedF_2015_ERR525721_bin.17_k119_2618_21 27840 28964 - GH172
pfam BackhedF_2015_ERR525721_bin.17_k119_2618 BackhedF_2015_ERR525721_bin.17_k119_2618_22 28977 29375 - EIIA-man
TC BackhedF_2015_ERR525721_bin.17_k119_2618 BackhedF_2015_ERR525721_bin.17_k119_2618_23 29402 30235 - 4.A.6.1.13
TC BackhedF_2015_ERR525721_bin.17_k119_2618 BackhedF_2015_ERR525721_bin.17_k119_2618_24 30238 31023 - 4.A.6.1.13
TC BackhedF_2015_ERR525721_bin.17_k119_2618 BackhedF_2015_ERR525721_bin.17_k119_2618_25 31033 31506 - 4.A.6.1.18
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_2618_21
Type: CAZyme
Location: 27840 - 28964 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_2618_22
Type: pfam
Location: 28977 - 29375 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_2618_23
Type: TC
Location: 29402 - 30235 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_2618_24
Type: TC
Location: 30238 - 31023 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_2618_25
Type: TC
Location: 31033 - 31506 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525721_bin.17_k119_2618_25 vegan > omnivore 1.02638 0.00701

🧭 Explore Read Mapping of CGC

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