Cluster: BackhedF_2015_ERR525721_bin.17_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525721_bin.17
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525721_bin.17_k119_10572 | BackhedF_2015_ERR525721_bin.17_k119_10572_10 | 9624 | 11840 | + | 9.B.97.5.1 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525721_bin.17_k119_10572 | BackhedF_2015_ERR525721_bin.17_k119_10572_11 | 12231 | 12359 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BackhedF_2015_ERR525721_bin.17_k119_10572 | BackhedF_2015_ERR525721_bin.17_k119_10572_12 | 12392 | 13654 | - | 2.A.55.3.6 |
| STP | BackhedF_2015_ERR525721_bin.17_k119_10572 | BackhedF_2015_ERR525721_bin.17_k119_10572_13 | 13663 | 15507 | - | CBS | CBS |
| CAZyme | BackhedF_2015_ERR525721_bin.17_k119_10572 | BackhedF_2015_ERR525721_bin.17_k119_10572_14 | 15838 | 17244 | - | CE4 |
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_10572_10
Type: TC
Location: 9624 - 11840 (+)
Type: TC
Location: 9624 - 11840 (+)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_10572_11
Type:
Location: 12231 - 12359 (-)
Type:
Location: 12231 - 12359 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_10572_12
Type: TC
Location: 12392 - 13654 (-)
Type: TC
Location: 12392 - 13654 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_10572_13
Type: STP
Location: 13663 - 15507 (-)
Type: STP
Location: 13663 - 15507 (-)
Gene ID: BackhedF_2015_ERR525721_bin.17_k119_10572_14
Type: CAZyme
Location: 15838 - 17244 (-)
Type: CAZyme
Location: 15838 - 17244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900542235
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.