Cluster: BackhedF_2015_ERR525690_bin.1_CGC95
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_05001
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_12 | 15641 | 16384 | - | 3.A.11.1.4 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_13 | 16408 | 18636 | - | 3.A.7.16.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_14 | 18796 | 19785 | - | 1.A.33.1.5 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_15 | 20253 | 23438 | - | GH106 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_16 | 23443 | 24945 | - | HTH_AraC | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_17 | 24957 | 26786 | - | 9.B.33.1.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_18 | 26931 | 27761 | - | 3.A.1.1.41 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_19 | 27764 | 28621 | - | 3.A.1.1.7 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_20 | 28798 | 30237 | - | SBP_bac_1 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_21 | 30364 | 32151 | - | GH2 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_22 | 32280 | 33104 | - | 3.A.1.1.36 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_23 | 33101 | 33997 | - | 3.A.1.1.36 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_24 | 34049 | 35473 | - | SBP_bac_1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_25 | 35860 | 36780 | - | HTH_5 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3324 | BackhedF_2015_ERR525690_bin.1_k119_3324_26 | 37023 | 39668 | - | CBM67 | GH78 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_12
Type: TC
Location: 15641 - 16384 (-)
Type: TC
Location: 15641 - 16384 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_13
Type: TC
Location: 16408 - 18636 (-)
Type: TC
Location: 16408 - 18636 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_14
Type: TC
Location: 18796 - 19785 (-)
Type: TC
Location: 18796 - 19785 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_15
Type: CAZyme
Location: 20253 - 23438 (-)
Type: CAZyme
Location: 20253 - 23438 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_16
Type: TF
Location: 23443 - 24945 (-)
Type: TF
Location: 23443 - 24945 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_17
Type: TC
Location: 24957 - 26786 (-)
Type: TC
Location: 24957 - 26786 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_18
Type: TC
Location: 26931 - 27761 (-)
Type: TC
Location: 26931 - 27761 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_19
Type: TC
Location: 27764 - 28621 (-)
Type: TC
Location: 27764 - 28621 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_20
Type: STP
Location: 28798 - 30237 (-)
Type: STP
Location: 28798 - 30237 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_21
Type: CAZyme
Location: 30364 - 32151 (-)
Type: CAZyme
Location: 30364 - 32151 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_22
Type: TC
Location: 32280 - 33104 (-)
Type: TC
Location: 32280 - 33104 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_23
Type: TC
Location: 33101 - 33997 (-)
Type: TC
Location: 33101 - 33997 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_24
Type: STP
Location: 34049 - 35473 (-)
Type: STP
Location: 34049 - 35473 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_25
Type: TF
Location: 35860 - 36780 (-)
Type: TF
Location: 35860 - 36780 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3324_26
Type: CAZyme
Location: 37023 - 39668 (-)
Type: CAZyme
Location: 37023 - 39668 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.