Cluster: BackhedF_2015_ERR525690_bin.1_CGC94
🧬 Cluster Details
- Gene Count: 32
- CAZyme Count: 9
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_02642
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_48 | 61607 | 68260 | + | CBM32 | CBM67 | CBM67 | GH78 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_49 | 68409 | 73922 | + | CBM67 | GH78 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_50 | 74019 | 80252 | + | CBM67 | GH78 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_51 | 80352 | 87374 | + | CBM67 | GH78 |
| peptidase | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_52 | 87525 | 89324 | + | C40.UPW |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_53 | 89611 | 91449 | - | 8.A.59.2.1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_54 | 91446 | 92996 | - | HTH_AraC | HTH_AraC |
| TF | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_55 | 93079 | 94530 | - | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_56 | 94842 | 96344 | + | 3.A.1.2.20 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_57 | 96366 | 97367 | + | 3.A.1.2.9 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_58 | 97370 | 98383 | + | 3.A.1.2.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_59 | 98469 | 99647 | + | 3.A.1.2.9 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_60 | 99875 | 100186 | + | rhaM |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_61 | 100315 | 101526 | - | Peripla_BP_4 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_62 | 101622 | 102884 | - | 3.A.1.2.8 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_63 | 102884 | 103888 | - | 3.A.1.2.9 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_64 | 103892 | 105043 | - | 3.A.1.2.20 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_65 | 105043 | 105399 | - | 3.A.1.2.26 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_66 | 105638 | 106492 | + | HTH_AraC | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_67 | 107406 | 108323 | + | 8.A.5.1.7 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_68 | 108372 | 109781 | - | Pyridoxal_deC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_69 | 109954 | 111381 | - | GH29 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_70 | 111530 | 112960 | - | CE20 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_71 | 112972 | 114615 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_72 | 114619 | 115374 | - | HTH_AraC | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_73 | 115380 | 117200 | - | 8.A.59.2.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_74 | 117626 | 118582 | + | 3.A.1.1.10 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_75 | 118633 | 119526 | + | 3.A.1.1.10 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_76 | 119572 | 121299 | + | SBP_bac_1 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_77 | 121377 | 124094 | + | CBM67 | GH78 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_78 | 124186 | 126879 | + | GH106 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3270 | BackhedF_2015_ERR525690_bin.1_k119_3270_79 | 126974 | 129079 | + | GH42 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_48
Type: CAZyme
Location: 61607 - 68260 (+)
Type: CAZyme
Location: 61607 - 68260 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_49
Type: CAZyme
Location: 68409 - 73922 (+)
Type: CAZyme
Location: 68409 - 73922 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_50
Type: CAZyme
Location: 74019 - 80252 (+)
Type: CAZyme
Location: 74019 - 80252 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_51
Type: CAZyme
Location: 80352 - 87374 (+)
Type: CAZyme
Location: 80352 - 87374 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_52
Type: peptidase
Location: 87525 - 89324 (+)
Type: peptidase
Location: 87525 - 89324 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_53
Type: TC
Location: 89611 - 91449 (-)
Type: TC
Location: 89611 - 91449 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_54
Type: TF
Location: 91446 - 92996 (-)
Type: TF
Location: 91446 - 92996 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_55
Type: TF
Location: 93079 - 94530 (-)
Type: TF
Location: 93079 - 94530 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_56
Type: TC
Location: 94842 - 96344 (+)
Type: TC
Location: 94842 - 96344 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_57
Type: TC
Location: 96366 - 97367 (+)
Type: TC
Location: 96366 - 97367 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_58
Type: TC
Location: 97370 - 98383 (+)
Type: TC
Location: 97370 - 98383 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_59
Type: TC
Location: 98469 - 99647 (+)
Type: TC
Location: 98469 - 99647 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_60
Type: pfam
Location: 99875 - 100186 (+)
Type: pfam
Location: 99875 - 100186 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_61
Type: pfam
Location: 100315 - 101526 (-)
Type: pfam
Location: 100315 - 101526 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_62
Type: TC
Location: 101622 - 102884 (-)
Type: TC
Location: 101622 - 102884 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_63
Type: TC
Location: 102884 - 103888 (-)
Type: TC
Location: 102884 - 103888 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_64
Type: TC
Location: 103892 - 105043 (-)
Type: TC
Location: 103892 - 105043 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_65
Type: TC
Location: 105043 - 105399 (-)
Type: TC
Location: 105043 - 105399 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_66
Type: TF
Location: 105638 - 106492 (+)
Type: TF
Location: 105638 - 106492 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_67
Type: TC
Location: 107406 - 108323 (+)
Type: TC
Location: 107406 - 108323 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_68
Type: pfam
Location: 108372 - 109781 (-)
Type: pfam
Location: 108372 - 109781 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_69
Type: CAZyme
Location: 109954 - 111381 (-)
Type: CAZyme
Location: 109954 - 111381 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_70
Type: CAZyme
Location: 111530 - 112960 (-)
Type: CAZyme
Location: 111530 - 112960 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_71
Type:
Location: 112972 - 114615 (-)
Type:
Location: 112972 - 114615 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_72
Type: TF
Location: 114619 - 115374 (-)
Type: TF
Location: 114619 - 115374 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_73
Type: TC
Location: 115380 - 117200 (-)
Type: TC
Location: 115380 - 117200 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_74
Type: TC
Location: 117626 - 118582 (+)
Type: TC
Location: 117626 - 118582 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_75
Type: TC
Location: 118633 - 119526 (+)
Type: TC
Location: 118633 - 119526 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_76
Type: STP
Location: 119572 - 121299 (+)
Type: STP
Location: 119572 - 121299 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_77
Type: CAZyme
Location: 121377 - 124094 (+)
Type: CAZyme
Location: 121377 - 124094 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_78
Type: CAZyme
Location: 124186 - 126879 (+)
Type: CAZyme
Location: 124186 - 126879 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3270_79
Type: CAZyme
Location: 126974 - 129079 (+)
Type: CAZyme
Location: 126974 - 129079 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.