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Cluster: BackhedF_2015_ERR525690_bin.1_CGC91

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525690_bin.1_k119_3264 BackhedF_2015_ERR525690_bin.1_k119_3264_16 32447 33688 - 2.A.37.3.3
STP BackhedF_2015_ERR525690_bin.1_k119_3264 BackhedF_2015_ERR525690_bin.1_k119_3264_17 33685 34311 - TetR_N
TC BackhedF_2015_ERR525690_bin.1_k119_3264 BackhedF_2015_ERR525690_bin.1_k119_3264_18 34627 35742 + 3.A.1.2.3
TC BackhedF_2015_ERR525690_bin.1_k119_3264 BackhedF_2015_ERR525690_bin.1_k119_3264_19 35822 37321 + 3.A.1.2.3
TC BackhedF_2015_ERR525690_bin.1_k119_3264 BackhedF_2015_ERR525690_bin.1_k119_3264_20 37392 38621 + 3.A.1.2.3
TF BackhedF_2015_ERR525690_bin.1_k119_3264 BackhedF_2015_ERR525690_bin.1_k119_3264_21 38644 39504 - HTH_AraC | HTH_AraC
CAZyme BackhedF_2015_ERR525690_bin.1_k119_3264 BackhedF_2015_ERR525690_bin.1_k119_3264_22 39638 42817 + GH106
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3264_16
Type: TC
Location: 32447 - 33688 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3264_17
Type: STP
Location: 33685 - 34311 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3264_18
Type: TC
Location: 34627 - 35742 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3264_19
Type: TC
Location: 35822 - 37321 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3264_20
Type: TC
Location: 37392 - 38621 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3264_21
Type: TF
Location: 38644 - 39504 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3264_22
Type: CAZyme
Location: 39638 - 42817 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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