Cluster: BackhedF_2015_ERR525690_bin.1_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_00362
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_350 | BackhedF_2015_ERR525690_bin.1_k119_350_11 | 13002 | 13910 | + | 3.A.1.1.11 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_350 | BackhedF_2015_ERR525690_bin.1_k119_350_12 | 13932 | 14780 | + | 3.A.1.1.11 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_350 | BackhedF_2015_ERR525690_bin.1_k119_350_13 | 14786 | 16852 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | BackhedF_2015_ERR525690_bin.1_k119_350 | BackhedF_2015_ERR525690_bin.1_k119_350_14 | 16970 | 17878 | - | HTH_AraC | HTH_AraC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_350 | BackhedF_2015_ERR525690_bin.1_k119_350_15 | 18063 | 19463 | + | GH4 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_350_11
Type: TC
Location: 13002 - 13910 (+)
Type: TC
Location: 13002 - 13910 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_350_12
Type: TC
Location: 13932 - 14780 (+)
Type: TC
Location: 13932 - 14780 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_350_13
Type:
Location: 14786 - 16852 (+)
Type:
Location: 14786 - 16852 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_350_14
Type: TF
Location: 16970 - 17878 (-)
Type: TF
Location: 16970 - 17878 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_350_15
Type: CAZyme
Location: 18063 - 19463 (+)
Type: CAZyme
Location: 18063 - 19463 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.