Cluster: BackhedF_2015_ERR525690_bin.1_CGC89
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_3031 | BackhedF_2015_ERR525690_bin.1_k119_3031_3 | 2235 | 2909 | + | 2.A.115.2.8 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_3031 | BackhedF_2015_ERR525690_bin.1_k119_3031_4 | 2953 | 3771 | - | Pyr_redox_2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_3031 | BackhedF_2015_ERR525690_bin.1_k119_3031_5 | 3788 | 5311 | - | CE20 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3031_3
Type: TC
Location: 2235 - 2909 (+)
Type: TC
Location: 2235 - 2909 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3031_4
Type: STP
Location: 2953 - 3771 (-)
Type: STP
Location: 2953 - 3771 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_3031_5
Type: CAZyme
Location: 3788 - 5311 (-)
Type: CAZyme
Location: 3788 - 5311 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.