Cluster: BackhedF_2015_ERR525690_bin.1_CGC87
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_05000
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_2988 | BackhedF_2015_ERR525690_bin.1_k119_2988_53 | 60076 | 61878 | + | 8.A.59.2.1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_2988 | BackhedF_2015_ERR525690_bin.1_k119_2988_54 | 61871 | 63118 | + | HTH_AraC | HTH_AraC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2988 | BackhedF_2015_ERR525690_bin.1_k119_2988_55 | 63247 | 65844 | - | GH116 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2988 | BackhedF_2015_ERR525690_bin.1_k119_2988_56 | 65878 | 66708 | - | 3.A.1.1.18 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2988 | BackhedF_2015_ERR525690_bin.1_k119_2988_57 | 66719 | 67612 | - | 3.A.1.1.20 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2988_53
Type: TC
Location: 60076 - 61878 (+)
Type: TC
Location: 60076 - 61878 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2988_54
Type: TF
Location: 61871 - 63118 (+)
Type: TF
Location: 61871 - 63118 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2988_55
Type: CAZyme
Location: 63247 - 65844 (-)
Type: CAZyme
Location: 63247 - 65844 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2988_56
Type: TC
Location: 65878 - 66708 (-)
Type: TC
Location: 65878 - 66708 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2988_57
Type: TC
Location: 66719 - 67612 (-)
Type: TC
Location: 66719 - 67612 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.