Cluster: BackhedF_2015_ERR525690_bin.1_CGC86
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_11 | 10709 | 11770 | - | 3.A.1.6.3 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_12 | 11770 | 12591 | - | 3.A.1.6.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_13 | 12604 | 13437 | - | 3.A.1.6.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_14 | 13465 | 14553 | - | 3.A.1.6.1 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_15 | 14675 | 14830 | - | DUF2292 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_16 | 15184 | 16545 | - | 2.A.66.1.34 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_17 | 16597 | 19095 | - | GH38 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_18 | 19200 | 19922 | - | Lactamase_B |
| STP | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_19 | 20164 | 21300 | - | Aminotran_1_2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_20 | 21317 | 22561 | - | GH29 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_21 | 22563 | 23588 | - | LacI |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2965 | BackhedF_2015_ERR525690_bin.1_k119_2965_22 | 23765 | 24025 | - | 3.A.1.1.41 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_11
Type: TC
Location: 10709 - 11770 (-)
Type: TC
Location: 10709 - 11770 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_12
Type: TC
Location: 11770 - 12591 (-)
Type: TC
Location: 11770 - 12591 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_13
Type: TC
Location: 12604 - 13437 (-)
Type: TC
Location: 12604 - 13437 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_14
Type: TC
Location: 13465 - 14553 (-)
Type: TC
Location: 13465 - 14553 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_15
Type: pfam
Location: 14675 - 14830 (-)
Type: pfam
Location: 14675 - 14830 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_16
Type: TC
Location: 15184 - 16545 (-)
Type: TC
Location: 15184 - 16545 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_17
Type: CAZyme
Location: 16597 - 19095 (-)
Type: CAZyme
Location: 16597 - 19095 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_18
Type: pfam
Location: 19200 - 19922 (-)
Type: pfam
Location: 19200 - 19922 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_19
Type: STP
Location: 20164 - 21300 (-)
Type: STP
Location: 20164 - 21300 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_20
Type: CAZyme
Location: 21317 - 22561 (-)
Type: CAZyme
Location: 21317 - 22561 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_21
Type: TF
Location: 22563 - 23588 (-)
Type: TF
Location: 22563 - 23588 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2965_22
Type: TC
Location: 23765 - 24025 (-)
Type: TC
Location: 23765 - 24025 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.