Cluster: BackhedF_2015_ERR525690_bin.1_CGC85
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_00364
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_138 | 199162 | 199899 | - | 3.A.1.124.6 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_139 | 199896 | 200657 | - | 3.A.1.124.2 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_140 | 200657 | 201358 | - | 3.A.1.124.6 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_141 | 201636 | 204680 | - | GH2 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_142 | 204722 | 206482 | - | 8.A.59.2.1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_143 | 206490 | 208019 | - | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_144 | 208189 | 209031 | - | 3.A.1.1.4 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_145 | 209028 | 209894 | - | 3.A.1.1.4 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_146 | 209956 | 211365 | - | 3.A.1.1.4 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_138
Type: TC
Location: 199162 - 199899 (-)
Type: TC
Location: 199162 - 199899 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_139
Type: TC
Location: 199896 - 200657 (-)
Type: TC
Location: 199896 - 200657 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_140
Type: TC
Location: 200657 - 201358 (-)
Type: TC
Location: 200657 - 201358 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_141
Type: CAZyme
Location: 201636 - 204680 (-)
Type: CAZyme
Location: 201636 - 204680 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_142
Type: TC
Location: 204722 - 206482 (-)
Type: TC
Location: 204722 - 206482 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_143
Type: TF
Location: 206490 - 208019 (-)
Type: TF
Location: 206490 - 208019 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_144
Type: TC
Location: 208189 - 209031 (-)
Type: TC
Location: 208189 - 209031 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_145
Type: TC
Location: 209028 - 209894 (-)
Type: TC
Location: 209028 - 209894 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_146
Type: TC
Location: 209956 - 211365 (-)
Type: TC
Location: 209956 - 211365 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.