Cluster: BackhedF_2015_ERR525690_bin.1_CGC83
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_04999
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_98 | 142340 | 144238 | + | GH2 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_99 | 144274 | 145668 | + | 2.A.2.3.1 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_100 | 145700 | 146542 | + | adh_short | KR | adh_short_C2 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_101 | 146490 | 147389 | + | Hydrolase | HAD_2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_102 | 147418 | 149115 | + | GH3 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_103 | 149235 | 151013 | + | GH2 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_104 | 151081 | 151713 | - | 9.B.158.1.3 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_98
Type: CAZyme
Location: 142340 - 144238 (+)
Type: CAZyme
Location: 142340 - 144238 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_99
Type: TC
Location: 144274 - 145668 (+)
Type: TC
Location: 144274 - 145668 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_100
Type: pfam
Location: 145700 - 146542 (+)
Type: pfam
Location: 145700 - 146542 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_101
Type: pfam
Location: 146490 - 147389 (+)
Type: pfam
Location: 146490 - 147389 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_102
Type: CAZyme
Location: 147418 - 149115 (+)
Type: CAZyme
Location: 147418 - 149115 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_103
Type: CAZyme
Location: 149235 - 151013 (+)
Type: CAZyme
Location: 149235 - 151013 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_104
Type: TC
Location: 151081 - 151713 (-)
Type: TC
Location: 151081 - 151713 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.