Cluster: BackhedF_2015_ERR525690_bin.1_CGC82
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_04597
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_87 | 124664 | 126184 | - | GH51_1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_88 | 126199 | 127056 | - | 3.A.1.1.34 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_89 | 127061 | 128065 | - | 3.A.1.1.34 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_90 | 128155 | 129588 | - | 3.A.1.1.34 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_91 | 129601 | 131538 | - | GH127 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_92 | 131753 | 132811 | - | LacI |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_93 | 133202 | 135148 | - | CBM48 | GH13_9 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2910 | BackhedF_2015_ERR525690_bin.1_k119_2910_94 | 135153 | 136511 | - | GH13_20 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_87
Type: CAZyme
Location: 124664 - 126184 (-)
Type: CAZyme
Location: 124664 - 126184 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_88
Type: TC
Location: 126199 - 127056 (-)
Type: TC
Location: 126199 - 127056 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_89
Type: TC
Location: 127061 - 128065 (-)
Type: TC
Location: 127061 - 128065 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_90
Type: TC
Location: 128155 - 129588 (-)
Type: TC
Location: 128155 - 129588 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_91
Type: CAZyme
Location: 129601 - 131538 (-)
Type: CAZyme
Location: 129601 - 131538 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_92
Type: TF
Location: 131753 - 132811 (-)
Type: TF
Location: 131753 - 132811 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_93
Type: CAZyme
Location: 133202 - 135148 (-)
Type: CAZyme
Location: 133202 - 135148 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2910_94
Type: CAZyme
Location: 135153 - 136511 (-)
Type: CAZyme
Location: 135153 - 136511 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.