Cluster: BackhedF_2015_ERR525690_bin.1_CGC75
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 7
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_03479
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_2756 | BackhedF_2015_ERR525690_bin.1_k119_2756_28 | 39298 | 40242 | + | 3.A.1.1.10 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2756 | BackhedF_2015_ERR525690_bin.1_k119_2756_29 | 40272 | 41141 | + | 3.A.1.1.10 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_2756 | BackhedF_2015_ERR525690_bin.1_k119_2756_30 | 41190 | 42899 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2756 | BackhedF_2015_ERR525690_bin.1_k119_2756_31 | 43044 | 46109 | + | GH2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2756 | BackhedF_2015_ERR525690_bin.1_k119_2756_32 | 46111 | 47193 | + | CE15 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2756 | BackhedF_2015_ERR525690_bin.1_k119_2756_33 | 47258 | 49528 | + | GH95 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2756 | BackhedF_2015_ERR525690_bin.1_k119_2756_34 | 49595 | 52312 | + | GH138 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2756 | BackhedF_2015_ERR525690_bin.1_k119_2756_35 | 52324 | 53670 | + | GH29 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2756 | BackhedF_2015_ERR525690_bin.1_k119_2756_36 | 53824 | 55842 | + | GH42 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2756 | BackhedF_2015_ERR525690_bin.1_k119_2756_37 | 56175 | 58484 | + | GH31_4 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_28
Type: TC
Location: 39298 - 40242 (+)
Type: TC
Location: 39298 - 40242 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_29
Type: TC
Location: 40272 - 41141 (+)
Type: TC
Location: 40272 - 41141 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_30
Type:
Location: 41190 - 42899 (+)
Type:
Location: 41190 - 42899 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_31
Type: CAZyme
Location: 43044 - 46109 (+)
Type: CAZyme
Location: 43044 - 46109 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_32
Type: CAZyme
Location: 46111 - 47193 (+)
Type: CAZyme
Location: 46111 - 47193 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_33
Type: CAZyme
Location: 47258 - 49528 (+)
Type: CAZyme
Location: 47258 - 49528 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_34
Type: CAZyme
Location: 49595 - 52312 (+)
Type: CAZyme
Location: 49595 - 52312 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_35
Type: CAZyme
Location: 52324 - 53670 (+)
Type: CAZyme
Location: 52324 - 53670 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_36
Type: CAZyme
Location: 53824 - 55842 (+)
Type: CAZyme
Location: 53824 - 55842 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_37
Type: CAZyme
Location: 56175 - 58484 (+)
Type: CAZyme
Location: 56175 - 58484 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.