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Cluster: BackhedF_2015_ERR525690_bin.1_CGC74

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525690_bin.1_k119_2756 BackhedF_2015_ERR525690_bin.1_k119_2756_4 2732 6442 + CBM9
TF BackhedF_2015_ERR525690_bin.1_k119_2756 BackhedF_2015_ERR525690_bin.1_k119_2756_5 6742 8232 - HTH_AraC | HTH_AraC
TC BackhedF_2015_ERR525690_bin.1_k119_2756 BackhedF_2015_ERR525690_bin.1_k119_2756_6 8225 9958 - 9.B.33.1.1
pfam BackhedF_2015_ERR525690_bin.1_k119_2756 BackhedF_2015_ERR525690_bin.1_k119_2756_7 10079 11152 - URO-D
TC BackhedF_2015_ERR525690_bin.1_k119_2756 BackhedF_2015_ERR525690_bin.1_k119_2756_8 11174 12004 - 3.A.1.1.42
TC BackhedF_2015_ERR525690_bin.1_k119_2756 BackhedF_2015_ERR525690_bin.1_k119_2756_9 12005 12862 - 3.A.1.1.42
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_4
Type: CAZyme
Location: 2732 - 6442 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_5
Type: TF
Location: 6742 - 8232 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_6
Type: TC
Location: 8225 - 9958 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_7
Type: pfam
Location: 10079 - 11152 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_8
Type: TC
Location: 11174 - 12004 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2756_9
Type: TC
Location: 12005 - 12862 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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