Cluster: BackhedF_2015_ERR525690_bin.1_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_07586
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_336 | BackhedF_2015_ERR525690_bin.1_k119_336_28 | 27768 | 28691 | - | 2.A.115.1.2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_336 | BackhedF_2015_ERR525690_bin.1_k119_336_29 | 28837 | 30183 | - | GH140 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_336 | BackhedF_2015_ERR525690_bin.1_k119_336_30 | 30485 | 31303 | + | GH43_18 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_336 | BackhedF_2015_ERR525690_bin.1_k119_336_31 | 31342 | 31677 | - | HTH_AraC | HTH_AraC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_336 | BackhedF_2015_ERR525690_bin.1_k119_336_32 | 31678 | 32751 | - | GH109 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_336 | BackhedF_2015_ERR525690_bin.1_k119_336_33 | 33315 | 42443 | - | GH43_22 | GH43_26 | GH43_27 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_336 | BackhedF_2015_ERR525690_bin.1_k119_336_34 | 42493 | 47706 | - | GH43_22 | GH43_34 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_336_28
Type: TC
Location: 27768 - 28691 (-)
Type: TC
Location: 27768 - 28691 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_336_29
Type: CAZyme
Location: 28837 - 30183 (-)
Type: CAZyme
Location: 28837 - 30183 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_336_30
Type: CAZyme
Location: 30485 - 31303 (+)
Type: CAZyme
Location: 30485 - 31303 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_336_31
Type: TF
Location: 31342 - 31677 (-)
Type: TF
Location: 31342 - 31677 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_336_32
Type: CAZyme
Location: 31678 - 32751 (-)
Type: CAZyme
Location: 31678 - 32751 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_336_33
Type: CAZyme
Location: 33315 - 42443 (-)
Type: CAZyme
Location: 33315 - 42443 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_336_34
Type: CAZyme
Location: 42493 - 47706 (-)
Type: CAZyme
Location: 42493 - 47706 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.