Cluster: BackhedF_2015_ERR525690_bin.1_CGC68
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_2551 | BackhedF_2015_ERR525690_bin.1_k119_2551_2 | 1256 | 2215 | - | 3.A.1.105.1 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_2551 | BackhedF_2015_ERR525690_bin.1_k119_2551_3 | 2217 | 2675 | - | GyrI-like |
| TF | BackhedF_2015_ERR525690_bin.1_k119_2551 | BackhedF_2015_ERR525690_bin.1_k119_2551_4 | 2757 | 3626 | - | HTH_AraC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2551 | BackhedF_2015_ERR525690_bin.1_k119_2551_5 | 3919 | 8343 | - | GH106 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2551 | BackhedF_2015_ERR525690_bin.1_k119_2551_6 | 8632 | 13722 | - | GH106 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_2551 | BackhedF_2015_ERR525690_bin.1_k119_2551_7 | 13879 | 14766 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_2551 | BackhedF_2015_ERR525690_bin.1_k119_2551_8 | 15027 | 16712 | - | PDDEXK_9 | AAA-ATPase_like |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2551 | BackhedF_2015_ERR525690_bin.1_k119_2551_9 | 16857 | 17624 | - | 3.A.1.122.2 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2551_2
Type: TC
Location: 1256 - 2215 (-)
Type: TC
Location: 1256 - 2215 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2551_3
Type: STP
Location: 2217 - 2675 (-)
Type: STP
Location: 2217 - 2675 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2551_4
Type: TF
Location: 2757 - 3626 (-)
Type: TF
Location: 2757 - 3626 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2551_5
Type: CAZyme
Location: 3919 - 8343 (-)
Type: CAZyme
Location: 3919 - 8343 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2551_6
Type: CAZyme
Location: 8632 - 13722 (-)
Type: CAZyme
Location: 8632 - 13722 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2551_7
Type:
Location: 13879 - 14766 (-)
Type:
Location: 13879 - 14766 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2551_8
Type: pfam
Location: 15027 - 16712 (-)
Type: pfam
Location: 15027 - 16712 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2551_9
Type: TC
Location: 16857 - 17624 (-)
Type: TC
Location: 16857 - 17624 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.