Cluster: BackhedF_2015_ERR525690_bin.1_CGC67
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_03089
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_18 | 20459 | 21769 | - | GH4 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_19 | 21937 | 22983 | - | SIS | SIS |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_20 | 22999 | 23919 | - | BcrAD_BadFG |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_21 | 23940 | 25253 | - | GH29 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_22 | 25263 | 26105 | - | 3.A.1.1.47 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_23 | 26121 | 27032 | - | 3.A.1.1.47 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_24 | 27138 | 28598 | - | SBP_bac_1 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_25 | 28855 | 37119 | - | CBM51 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_26 | 37390 | 42762 | - | CBM51 | GH98 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_18
Type: CAZyme
Location: 20459 - 21769 (-)
Type: CAZyme
Location: 20459 - 21769 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_19
Type: STP
Location: 21937 - 22983 (-)
Type: STP
Location: 21937 - 22983 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_20
Type: pfam
Location: 22999 - 23919 (-)
Type: pfam
Location: 22999 - 23919 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_21
Type: CAZyme
Location: 23940 - 25253 (-)
Type: CAZyme
Location: 23940 - 25253 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_22
Type: TC
Location: 25263 - 26105 (-)
Type: TC
Location: 25263 - 26105 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_23
Type: TC
Location: 26121 - 27032 (-)
Type: TC
Location: 26121 - 27032 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_24
Type: STP
Location: 27138 - 28598 (-)
Type: STP
Location: 27138 - 28598 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_25
Type: CAZyme
Location: 28855 - 37119 (-)
Type: CAZyme
Location: 28855 - 37119 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_26
Type: CAZyme
Location: 37390 - 42762 (-)
Type: CAZyme
Location: 37390 - 42762 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.