Cluster: BackhedF_2015_ERR525690_bin.1_CGC66
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_07585
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_6 | 5846 | 8446 | - | 3.A.9.1.2 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_7 | 8634 | 9629 | + | SPL |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_8 | 9742 | 11439 | - | GH63 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_9 | 11565 | 12398 | - | 3.A.1.1.47 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2483 | BackhedF_2015_ERR525690_bin.1_k119_2483_10 | 12411 | 13301 | - | 3.A.1.1.47 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_6
Type: TC
Location: 5846 - 8446 (-)
Type: TC
Location: 5846 - 8446 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_7
Type: pfam
Location: 8634 - 9629 (+)
Type: pfam
Location: 8634 - 9629 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_8
Type: CAZyme
Location: 9742 - 11439 (-)
Type: CAZyme
Location: 9742 - 11439 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_9
Type: TC
Location: 11565 - 12398 (-)
Type: TC
Location: 11565 - 12398 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2483_10
Type: TC
Location: 12411 - 13301 (-)
Type: TC
Location: 12411 - 13301 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.