Cluster: BackhedF_2015_ERR525690_bin.1_CGC65
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_04291
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_32 | 38593 | 39777 | - | GH110 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_33 | 39770 | 39898 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_34 | 39895 | 40815 | - | 3.A.1.1.9 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_35 | 40827 | 41762 | - | 3.A.1.1.9 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_36 | 41863 | 43557 | - | 3.A.1.1.9 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_37 | 43728 | 45665 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_38 | 45652 | 47388 | - | GH63 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_39 | 47459 | 49108 | - | HTH_AraC | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_40 | 49110 | 50828 | - | 8.A.59.2.1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_32
Type: CAZyme
Location: 38593 - 39777 (-)
Type: CAZyme
Location: 38593 - 39777 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_33
Type:
Location: 39770 - 39898 (-)
Type:
Location: 39770 - 39898 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_34
Type: TC
Location: 39895 - 40815 (-)
Type: TC
Location: 39895 - 40815 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_35
Type: TC
Location: 40827 - 41762 (-)
Type: TC
Location: 40827 - 41762 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_36
Type: TC
Location: 41863 - 43557 (-)
Type: TC
Location: 41863 - 43557 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_37
Type:
Location: 43728 - 45665 (-)
Type:
Location: 43728 - 45665 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_38
Type: CAZyme
Location: 45652 - 47388 (-)
Type: CAZyme
Location: 45652 - 47388 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_39
Type: TF
Location: 47459 - 49108 (-)
Type: TF
Location: 47459 - 49108 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_40
Type: TC
Location: 49110 - 50828 (-)
Type: TC
Location: 49110 - 50828 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.