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Cluster: BackhedF_2015_ERR525690_bin.1_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_8 10070 12175 - GH95
TC BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_9 12199 13044 - 3.A.1.1.39
TC BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_10 13069 13977 - 3.A.1.1.11
STP BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_11 14034 15524 - SBP_bac_1
TC BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_12 15622 17415 + 9.B.33.1.1
TF BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_13 17449 19035 + HTH_AraC
TF BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_14 19058 19921 - HTH_AraC
CAZyme BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_15 20127 22301 + CBM67 | GH78
TC BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_16 22496 23500 - 9.B.10.1.1
pfam BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_17 23590 24456 - DUF1980 | DUF1980_C
pfam BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_18 24453 26015 - cobW | ArsP_1
TC BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_19 26030 26830 - 3.A.1.15.3
TC BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_20 26827 27489 - 3.A.1.15.11
TC BackhedF_2015_ERR525690_bin.1_k119_2464 BackhedF_2015_ERR525690_bin.1_k119_2464_21 27557 28621 - 3.A.1.15.11
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_8
Type: CAZyme
Location: 10070 - 12175 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_9
Type: TC
Location: 12199 - 13044 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_10
Type: TC
Location: 13069 - 13977 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_11
Type: STP
Location: 14034 - 15524 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_12
Type: TC
Location: 15622 - 17415 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_13
Type: TF
Location: 17449 - 19035 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_14
Type: TF
Location: 19058 - 19921 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_15
Type: CAZyme
Location: 20127 - 22301 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_16
Type: TC
Location: 22496 - 23500 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_17
Type: pfam
Location: 23590 - 24456 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_18
Type: pfam
Location: 24453 - 26015 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_19
Type: TC
Location: 26030 - 26830 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_20
Type: TC
Location: 26827 - 27489 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_21
Type: TC
Location: 27557 - 28621 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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