Cluster: BackhedF_2015_ERR525690_bin.1_CGC63
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_00051
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_2 | 1013 | 2803 | - | 8.A.59.2.1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_3 | 2866 | 3879 | + | HTH_AraC | HTH_AraC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2464 | BackhedF_2015_ERR525690_bin.1_k119_2464_4 | 3924 | 6293 | - | GH31_3 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_2
Type: TC
Location: 1013 - 2803 (-)
Type: TC
Location: 1013 - 2803 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_3
Type: TF
Location: 2866 - 3879 (+)
Type: TF
Location: 2866 - 3879 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2464_4
Type: CAZyme
Location: 3924 - 6293 (-)
Type: CAZyme
Location: 3924 - 6293 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.