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Cluster: BackhedF_2015_ERR525690_bin.1_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_84 93499 95337 + 8.A.59.2.1
TF BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_85 95315 96880 + HTH_AraC | HTH_AraC
pfam BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_86 97143 98504 + SBP_bac_1 | SBP_bac_8
TC BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_87 98531 99427 + 3.A.1.1.20
TC BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_88 99427 100248 + 3.A.1.1.26
CAZyme BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_89 100274 105904 + CBM32 | CBM32 | PL8_3
TF BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_90 106043 106954 - HTH_5
CAZyme BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_91 107145 108938 + GH2
TF BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_92 109049 111301 - HTH_AraC
NULL(UNKNOWN) BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_93 111459 111623 + NULL(UNKNOWN)
[View Structural Homologs]
TC BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_94 111616 112560 + 3.A.1.1.10
TC BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_95 112573 113472 + 3.A.1.1.10
TC BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_96 113496 115058 + 3.A.1.1.10
CAZyme BackhedF_2015_ERR525690_bin.1_k119_2323 BackhedF_2015_ERR525690_bin.1_k119_2323_97 115095 116240 + GH88
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_84
Type: TC
Location: 93499 - 95337 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_85
Type: TF
Location: 95315 - 96880 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_86
Type: pfam
Location: 97143 - 98504 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_87
Type: TC
Location: 98531 - 99427 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_88
Type: TC
Location: 99427 - 100248 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_89
Type: CAZyme
Location: 100274 - 105904 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_90
Type: TF
Location: 106043 - 106954 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_91
Type: CAZyme
Location: 107145 - 108938 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_92
Type: TF
Location: 109049 - 111301 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_93
Type:
Location: 111459 - 111623 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_94
Type: TC
Location: 111616 - 112560 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_95
Type: TC
Location: 112573 - 113472 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_96
Type: TC
Location: 113496 - 115058 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2323_97
Type: CAZyme
Location: 115095 - 116240 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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