Cluster: BackhedF_2015_ERR525690_bin.1_CGC61
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_04993
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_1 | 323 | 1153 | - | 3.A.1.1.42 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_2 | 1155 | 2012 | - | 3.A.1.1.7 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_3 | 2235 | 3614 | - | SBP_bac_1 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_4 | 3924 | 5018 | - | GH172 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_5 | 5161 | 5985 | - | 3.A.1.1.39 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_6 | 6023 | 6904 | - | 3.A.1.1.20 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_7 | 6977 | 8326 | - | SBP_bac_1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_8 | 8673 | 10178 | - | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_9 | 10200 | 11966 | - | 9.B.33.1.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_10 | 12899 | 14689 | - | 9.B.33.1.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_11 | 14714 | 15541 | - | 3.A.1.1.42 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_12 | 15541 | 16398 | - | 3.A.1.1.42 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_13 | 16465 | 17850 | - | SBP_bac_1 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2277 | BackhedF_2015_ERR525690_bin.1_k119_2277_14 | 17953 | 20034 | - | GH78 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_1
Type: TC
Location: 323 - 1153 (-)
Type: TC
Location: 323 - 1153 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_2
Type: TC
Location: 1155 - 2012 (-)
Type: TC
Location: 1155 - 2012 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_3
Type: STP
Location: 2235 - 3614 (-)
Type: STP
Location: 2235 - 3614 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_4
Type: CAZyme
Location: 3924 - 5018 (-)
Type: CAZyme
Location: 3924 - 5018 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_5
Type: TC
Location: 5161 - 5985 (-)
Type: TC
Location: 5161 - 5985 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_6
Type: TC
Location: 6023 - 6904 (-)
Type: TC
Location: 6023 - 6904 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_7
Type: STP
Location: 6977 - 8326 (-)
Type: STP
Location: 6977 - 8326 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_8
Type: TF
Location: 8673 - 10178 (-)
Type: TF
Location: 8673 - 10178 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_9
Type: TC
Location: 10200 - 11966 (-)
Type: TC
Location: 10200 - 11966 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_10
Type: TC
Location: 12899 - 14689 (-)
Type: TC
Location: 12899 - 14689 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_11
Type: TC
Location: 14714 - 15541 (-)
Type: TC
Location: 14714 - 15541 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_12
Type: TC
Location: 15541 - 16398 (-)
Type: TC
Location: 15541 - 16398 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_13
Type: STP
Location: 16465 - 17850 (-)
Type: STP
Location: 16465 - 17850 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2277_14
Type: CAZyme
Location: 17953 - 20034 (-)
Type: CAZyme
Location: 17953 - 20034 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.