Cluster: BackhedF_2015_ERR525690_bin.1_CGC60
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_2220 | BackhedF_2015_ERR525690_bin.1_k119_2220_52 | 69474 | 70955 | - | 9.A.11.1.2 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_2220 | BackhedF_2015_ERR525690_bin.1_k119_2220_53 | 71078 | 71752 | - | GntR |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_2220 | BackhedF_2015_ERR525690_bin.1_k119_2220_54 | 71805 | 72680 | - | GHMP_kinases_N | GHMP_kinases_C |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2220 | BackhedF_2015_ERR525690_bin.1_k119_2220_55 | 72815 | 74383 | - | CBM50 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2220_52
Type: TC
Location: 69474 - 70955 (-)
Type: TC
Location: 69474 - 70955 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2220_53
Type: TF
Location: 71078 - 71752 (-)
Type: TF
Location: 71078 - 71752 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2220_54
Type: pfam
Location: 71805 - 72680 (-)
Type: pfam
Location: 71805 - 72680 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2220_55
Type: CAZyme
Location: 72815 - 74383 (-)
Type: CAZyme
Location: 72815 - 74383 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.