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Cluster: BackhedF_2015_ERR525690_bin.1_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525690_bin.1_k119_326 BackhedF_2015_ERR525690_bin.1_k119_326_61 78619 80406 - GH78
TC BackhedF_2015_ERR525690_bin.1_k119_326 BackhedF_2015_ERR525690_bin.1_k119_326_62 80524 81357 - 3.A.1.1.45
TC BackhedF_2015_ERR525690_bin.1_k119_326 BackhedF_2015_ERR525690_bin.1_k119_326_63 81359 82201 - 3.A.1.1.20
STP BackhedF_2015_ERR525690_bin.1_k119_326 BackhedF_2015_ERR525690_bin.1_k119_326_64 82229 83527 - SBP_bac_1
TF BackhedF_2015_ERR525690_bin.1_k119_326 BackhedF_2015_ERR525690_bin.1_k119_326_65 83701 85257 - HTH_AraC | HTH_AraC
TC BackhedF_2015_ERR525690_bin.1_k119_326 BackhedF_2015_ERR525690_bin.1_k119_326_66 85257 86975 - 9.B.33.1.1
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_326_61
Type: CAZyme
Location: 78619 - 80406 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_326_62
Type: TC
Location: 80524 - 81357 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_326_63
Type: TC
Location: 81359 - 82201 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_326_64
Type: STP
Location: 82229 - 83527 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_326_65
Type: TF
Location: 83701 - 85257 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_326_66
Type: TC
Location: 85257 - 86975 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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