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Cluster: BackhedF_2015_ERR525690_bin.1_CGC59

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525690_bin.1_k119_2220 BackhedF_2015_ERR525690_bin.1_k119_2220_21 28444 30432 + CBM20 | GH13_1
CAZyme BackhedF_2015_ERR525690_bin.1_k119_2220 BackhedF_2015_ERR525690_bin.1_k119_2220_22 30518 32287 - CBM34 | GH13_20
TC BackhedF_2015_ERR525690_bin.1_k119_2220 BackhedF_2015_ERR525690_bin.1_k119_2220_23 32297 33142 - 3.A.1.1.6
TC BackhedF_2015_ERR525690_bin.1_k119_2220 BackhedF_2015_ERR525690_bin.1_k119_2220_24 33142 34029 - 3.A.1.1.2
pfam BackhedF_2015_ERR525690_bin.1_k119_2220 BackhedF_2015_ERR525690_bin.1_k119_2220_25 34089 35447 - SBP_bac_1 | SBP_bac_8
CAZyme BackhedF_2015_ERR525690_bin.1_k119_2220 BackhedF_2015_ERR525690_bin.1_k119_2220_26 36014 42283 + CBM32 | GH84
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2220_21
Type: CAZyme
Location: 28444 - 30432 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2220_22
Type: CAZyme
Location: 30518 - 32287 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2220_23
Type: TC
Location: 32297 - 33142 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2220_24
Type: TC
Location: 33142 - 34029 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2220_25
Type: pfam
Location: 34089 - 35447 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2220_26
Type: CAZyme
Location: 36014 - 42283 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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