Cluster: BackhedF_2015_ERR525690_bin.1_CGC58
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_07584
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_2163 | BackhedF_2015_ERR525690_bin.1_k119_2163_13 | 12271 | 13239 | + | 3.A.1.1.10 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_2163 | BackhedF_2015_ERR525690_bin.1_k119_2163_14 | 13281 | 15032 | + | SBP_bac_1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2163 | BackhedF_2015_ERR525690_bin.1_k119_2163_15 | 15129 | 16058 | + | 3.A.1.1.29 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2163 | BackhedF_2015_ERR525690_bin.1_k119_2163_16 | 16273 | 19365 | + | GH38 |
| peptidase | BackhedF_2015_ERR525690_bin.1_k119_2163 | BackhedF_2015_ERR525690_bin.1_k119_2163_17 | 19467 | 20894 | + | M17.UPW |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_2163 | BackhedF_2015_ERR525690_bin.1_k119_2163_18 | 20891 | 22516 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_2163 | BackhedF_2015_ERR525690_bin.1_k119_2163_19 | 22538 | 24202 | + | GH123 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_2163 | BackhedF_2015_ERR525690_bin.1_k119_2163_20 | 24238 | 26019 | + | 8.A.59.2.1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2163_13
Type: TC
Location: 12271 - 13239 (+)
Type: TC
Location: 12271 - 13239 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2163_14
Type: STP
Location: 13281 - 15032 (+)
Type: STP
Location: 13281 - 15032 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2163_15
Type: TC
Location: 15129 - 16058 (+)
Type: TC
Location: 15129 - 16058 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2163_16
Type: CAZyme
Location: 16273 - 19365 (+)
Type: CAZyme
Location: 16273 - 19365 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2163_17
Type: peptidase
Location: 19467 - 20894 (+)
Type: peptidase
Location: 19467 - 20894 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2163_18
Type:
Location: 20891 - 22516 (+)
Type:
Location: 20891 - 22516 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2163_19
Type: CAZyme
Location: 22538 - 24202 (+)
Type: CAZyme
Location: 22538 - 24202 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_2163_20
Type: TC
Location: 24238 - 26019 (+)
Type: TC
Location: 24238 - 26019 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.