Cluster: BackhedF_2015_ERR525690_bin.1_CGC53
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_00269
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_1749 | BackhedF_2015_ERR525690_bin.1_k119_1749_29 | 44199 | 45953 | - | 8.A.59.2.1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_1749 | BackhedF_2015_ERR525690_bin.1_k119_1749_30 | 45950 | 47554 | - | HTH_AraC | HTH_AraC |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_1749 | BackhedF_2015_ERR525690_bin.1_k119_1749_31 | 47707 | 48663 | - | Peptidase_C39_2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_1749 | BackhedF_2015_ERR525690_bin.1_k119_1749_32 | 48760 | 51021 | - | GT35 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1749_29
Type: TC
Location: 44199 - 45953 (-)
Type: TC
Location: 44199 - 45953 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1749_30
Type: TF
Location: 45950 - 47554 (-)
Type: TF
Location: 45950 - 47554 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1749_31
Type: pfam
Location: 47707 - 48663 (-)
Type: pfam
Location: 47707 - 48663 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1749_32
Type: CAZyme
Location: 48760 - 51021 (-)
Type: CAZyme
Location: 48760 - 51021 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.