Cluster: BackhedF_2015_ERR525690_bin.1_CGC42
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 4
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_01644
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_32 | 32733 | 34571 | + | 9.B.33.1.1 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_33 | 34678 | 37362 | - | GH38 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_34 | 37408 | 39630 | - | GH95 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_35 | 39659 | 41947 | - | HTH_AraC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_36 | 41969 | 45181 | - | GH38 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_37 | 45192 | 46895 | - | 3.A.1.1.10 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_38 | 46953 | 47873 | - | 3.A.1.1.29 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_39 | 47887 | 48807 | - | 3.A.1.1.10 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_40 | 49003 | 51597 | - | Glyco_hydro_38N |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_41 | 51910 | 53208 | - | GH4 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_42 | 53366 | 54247 | - | 3.A.1.1.9 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_43 | 54263 | 55162 | - | 3.A.1.1.9 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_44 | 55193 | 56866 | - | 3.A.1.1.10 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1315 | BackhedF_2015_ERR525690_bin.1_k119_1315_45 | 57118 | 58812 | + | 8.A.59.2.1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_32
Type: TC
Location: 32733 - 34571 (+)
Type: TC
Location: 32733 - 34571 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_33
Type: CAZyme
Location: 34678 - 37362 (-)
Type: CAZyme
Location: 34678 - 37362 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_34
Type: CAZyme
Location: 37408 - 39630 (-)
Type: CAZyme
Location: 37408 - 39630 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_35
Type: TF
Location: 39659 - 41947 (-)
Type: TF
Location: 39659 - 41947 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_36
Type: CAZyme
Location: 41969 - 45181 (-)
Type: CAZyme
Location: 41969 - 45181 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_37
Type: TC
Location: 45192 - 46895 (-)
Type: TC
Location: 45192 - 46895 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_38
Type: TC
Location: 46953 - 47873 (-)
Type: TC
Location: 46953 - 47873 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_39
Type: TC
Location: 47887 - 48807 (-)
Type: TC
Location: 47887 - 48807 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_40
Type: pfam
Location: 49003 - 51597 (-)
Type: pfam
Location: 49003 - 51597 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_41
Type: CAZyme
Location: 51910 - 53208 (-)
Type: CAZyme
Location: 51910 - 53208 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_42
Type: TC
Location: 53366 - 54247 (-)
Type: TC
Location: 53366 - 54247 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_43
Type: TC
Location: 54263 - 55162 (-)
Type: TC
Location: 54263 - 55162 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_44
Type: TC
Location: 55193 - 56866 (-)
Type: TC
Location: 55193 - 56866 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1315_45
Type: TC
Location: 57118 - 58812 (+)
Type: TC
Location: 57118 - 58812 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.