Cluster: BackhedF_2015_ERR525690_bin.1_CGC38
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_07581
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_1203 | BackhedF_2015_ERR525690_bin.1_k119_1203_51 | 59750 | 60811 | - | GH43_24 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_1203 | BackhedF_2015_ERR525690_bin.1_k119_1203_52 | 60926 | 62473 | - | HTH_AraC | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1203 | BackhedF_2015_ERR525690_bin.1_k119_1203_53 | 62470 | 64266 | - | 9.B.33.1.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1203 | BackhedF_2015_ERR525690_bin.1_k119_1203_54 | 64271 | 65083 | - | 3.A.1.1.28 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1203 | BackhedF_2015_ERR525690_bin.1_k119_1203_55 | 65084 | 65968 | - | 3.A.1.1.41 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_1203 | BackhedF_2015_ERR525690_bin.1_k119_1203_56 | 66033 | 67358 | - | SBP_bac_1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1203 | BackhedF_2015_ERR525690_bin.1_k119_1203_57 | 67577 | 68905 | + | 9.B.14.1.13 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_1203 | BackhedF_2015_ERR525690_bin.1_k119_1203_58 | 68910 | 69650 | + | LytTR |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1203 | BackhedF_2015_ERR525690_bin.1_k119_1203_59 | 69819 | 70670 | + | 3.A.1.144.1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1203_51
Type: CAZyme
Location: 59750 - 60811 (-)
Type: CAZyme
Location: 59750 - 60811 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1203_52
Type: TF
Location: 60926 - 62473 (-)
Type: TF
Location: 60926 - 62473 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1203_53
Type: TC
Location: 62470 - 64266 (-)
Type: TC
Location: 62470 - 64266 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1203_54
Type: TC
Location: 64271 - 65083 (-)
Type: TC
Location: 64271 - 65083 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1203_55
Type: TC
Location: 65084 - 65968 (-)
Type: TC
Location: 65084 - 65968 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1203_56
Type: STP
Location: 66033 - 67358 (-)
Type: STP
Location: 66033 - 67358 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1203_57
Type: TC
Location: 67577 - 68905 (+)
Type: TC
Location: 67577 - 68905 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1203_58
Type: TF
Location: 68910 - 69650 (+)
Type: TF
Location: 68910 - 69650 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1203_59
Type: TC
Location: 69819 - 70670 (+)
Type: TC
Location: 69819 - 70670 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.