Cluster: BackhedF_2015_ERR525690_bin.1_CGC34
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_00242
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_1098 | BackhedF_2015_ERR525690_bin.1_k119_1098_16 | 12703 | 13464 | + | 3.A.1.122.14 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_1098 | BackhedF_2015_ERR525690_bin.1_k119_1098_17 | 13706 | 15568 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1098 | BackhedF_2015_ERR525690_bin.1_k119_1098_18 | 15586 | 16965 | + | 3.A.1.122.2 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_1098 | BackhedF_2015_ERR525690_bin.1_k119_1098_19 | 17217 | 18041 | - | HTH_AraC | HTH_AraC |
| STP | BackhedF_2015_ERR525690_bin.1_k119_1098 | BackhedF_2015_ERR525690_bin.1_k119_1098_20 | 18444 | 19898 | + | SBP_bac_1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1098 | BackhedF_2015_ERR525690_bin.1_k119_1098_21 | 19996 | 20895 | + | 3.A.1.1.20 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1098 | BackhedF_2015_ERR525690_bin.1_k119_1098_22 | 20910 | 21794 | + | 3.A.1.1.18 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_1098 | BackhedF_2015_ERR525690_bin.1_k119_1098_23 | 21808 | 21987 | + | DUF6903 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_1098 | BackhedF_2015_ERR525690_bin.1_k119_1098_24 | 22028 | 24184 | + | GH112 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1098_16
Type: TC
Location: 12703 - 13464 (+)
Type: TC
Location: 12703 - 13464 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1098_17
Type:
Location: 13706 - 15568 (+)
Type:
Location: 13706 - 15568 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1098_18
Type: TC
Location: 15586 - 16965 (+)
Type: TC
Location: 15586 - 16965 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1098_19
Type: TF
Location: 17217 - 18041 (-)
Type: TF
Location: 17217 - 18041 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1098_20
Type: STP
Location: 18444 - 19898 (+)
Type: STP
Location: 18444 - 19898 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1098_21
Type: TC
Location: 19996 - 20895 (+)
Type: TC
Location: 19996 - 20895 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1098_22
Type: TC
Location: 20910 - 21794 (+)
Type: TC
Location: 20910 - 21794 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1098_23
Type: pfam
Location: 21808 - 21987 (+)
Type: pfam
Location: 21808 - 21987 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1098_24
Type: CAZyme
Location: 22028 - 24184 (+)
Type: CAZyme
Location: 22028 - 24184 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.