Cluster: BackhedF_2015_ERR525690_bin.1_CGC32
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_01704
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_1058 | BackhedF_2015_ERR525690_bin.1_k119_1058_2 | 1202 | 4405 | - | CBM32 | CBM32 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_1058 | BackhedF_2015_ERR525690_bin.1_k119_1058_3 | 4468 | 8301 | - | GH136 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_1058 | BackhedF_2015_ERR525690_bin.1_k119_1058_4 | 8317 | 9189 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_1058 | BackhedF_2015_ERR525690_bin.1_k119_1058_5 | 9176 | 11521 | - | GH65 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1058 | BackhedF_2015_ERR525690_bin.1_k119_1058_6 | 11529 | 12371 | - | 3.A.1.1.47 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1058 | BackhedF_2015_ERR525690_bin.1_k119_1058_7 | 12372 | 13259 | - | 3.A.1.1.47 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1058 | BackhedF_2015_ERR525690_bin.1_k119_1058_8 | 13359 | 14789 | - | 3.A.1.1.47 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_1058 | BackhedF_2015_ERR525690_bin.1_k119_1058_9 | 15221 | 16987 | + | 8.A.59.2.1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1058_2
Type: CAZyme
Location: 1202 - 4405 (-)
Type: CAZyme
Location: 1202 - 4405 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1058_3
Type: CAZyme
Location: 4468 - 8301 (-)
Type: CAZyme
Location: 4468 - 8301 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1058_4
Type:
Location: 8317 - 9189 (-)
Type:
Location: 8317 - 9189 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1058_5
Type: CAZyme
Location: 9176 - 11521 (-)
Type: CAZyme
Location: 9176 - 11521 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1058_6
Type: TC
Location: 11529 - 12371 (-)
Type: TC
Location: 11529 - 12371 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1058_7
Type: TC
Location: 12372 - 13259 (-)
Type: TC
Location: 12372 - 13259 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1058_8
Type: TC
Location: 13359 - 14789 (-)
Type: TC
Location: 13359 - 14789 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_1058_9
Type: TC
Location: 15221 - 16987 (+)
Type: TC
Location: 15221 - 16987 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.