Cluster: BackhedF_2015_ERR525690_bin.1_CGC30
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_07580
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_954 | BackhedF_2015_ERR525690_bin.1_k119_954_20 | 28813 | 31041 | - | GH95 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_954 | BackhedF_2015_ERR525690_bin.1_k119_954_21 | 31380 | 32201 | - | 3.A.1.1.45 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_954 | BackhedF_2015_ERR525690_bin.1_k119_954_22 | 32201 | 33079 | - | 3.A.1.1.7 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_954 | BackhedF_2015_ERR525690_bin.1_k119_954_23 | 33165 | 34607 | - | SBP_bac_1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_954 | BackhedF_2015_ERR525690_bin.1_k119_954_24 | 34820 | 36634 | + | 8.A.59.2.1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_954_20
Type: CAZyme
Location: 28813 - 31041 (-)
Type: CAZyme
Location: 28813 - 31041 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_954_21
Type: TC
Location: 31380 - 32201 (-)
Type: TC
Location: 31380 - 32201 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_954_22
Type: TC
Location: 32201 - 33079 (-)
Type: TC
Location: 32201 - 33079 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_954_23
Type: STP
Location: 33165 - 34607 (-)
Type: STP
Location: 33165 - 34607 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_954_24
Type: TC
Location: 34820 - 36634 (+)
Type: TC
Location: 34820 - 36634 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.