Cluster: BackhedF_2015_ERR525690_bin.1_CGC27
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_917 | BackhedF_2015_ERR525690_bin.1_k119_917_14 | 13613 | 14935 | + | 2.A.22.5.2 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_917 | BackhedF_2015_ERR525690_bin.1_k119_917_15 | 15073 | 15603 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_917 | BackhedF_2015_ERR525690_bin.1_k119_917_16 | 15817 | 16323 | + | SEC-C |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_917 | BackhedF_2015_ERR525690_bin.1_k119_917_17 | 16476 | 18707 | + | GH106 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_917 | BackhedF_2015_ERR525690_bin.1_k119_917_18 | 18786 | 20351 | - | 0035607 | 0036286 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_917 | BackhedF_2015_ERR525690_bin.1_k119_917_19 | 20445 | 22178 | - | 8.A.59.2.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_917 | BackhedF_2015_ERR525690_bin.1_k119_917_20 | 22394 | 23740 | + | 3.A.1.1.28 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_917 | BackhedF_2015_ERR525690_bin.1_k119_917_21 | 23820 | 24716 | + | 3.A.1.1.28 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_917 | BackhedF_2015_ERR525690_bin.1_k119_917_22 | 24716 | 25585 | + | 3.A.1.1.45 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_917_14
Type: TC
Location: 13613 - 14935 (+)
Type: TC
Location: 13613 - 14935 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_917_15
Type:
Location: 15073 - 15603 (+)
Type:
Location: 15073 - 15603 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_917_16
Type: pfam
Location: 15817 - 16323 (+)
Type: pfam
Location: 15817 - 16323 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_917_17
Type: CAZyme
Location: 16476 - 18707 (+)
Type: CAZyme
Location: 16476 - 18707 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_917_18
Type: TF
Location: 18786 - 20351 (-)
Type: TF
Location: 18786 - 20351 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_917_19
Type: TC
Location: 20445 - 22178 (-)
Type: TC
Location: 20445 - 22178 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_917_20
Type: TC
Location: 22394 - 23740 (+)
Type: TC
Location: 22394 - 23740 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_917_21
Type: TC
Location: 23820 - 24716 (+)
Type: TC
Location: 23820 - 24716 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_917_22
Type: TC
Location: 24716 - 25585 (+)
Type: TC
Location: 24716 - 25585 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.