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Cluster: BackhedF_2015_ERR525690_bin.1_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_9 8229 9890 - GH13_31
TF BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_10 10201 11226 - LacI
pfam BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_11 11286 11987 - Lactamase_B_3
TC BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_12 12084 12935 - 2.A.119.2.1
NULL(UNKNOWN) BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_13 13077 13739 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_14 13938 23366 - CBM40 | CBM40 | GH33 | GH33
NULL(UNKNOWN) BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_15 23774 24160 - NULL(UNKNOWN)
[View Structural Homologs]
pfam BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_16 24366 25187 - Acetyltransf_1
CAZyme BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_17 25285 26955 - GH13_31
TC BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_18 27013 27852 - 3.A.1.1.27
TC BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_19 27849 29216 - 3.A.1.1.27
TC BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_20 29327 30604 - 3.A.1.1.27
pfam BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_21 30896 32482 - DDE_Tnp_1 | DUF772 | DDE_Tnp_1_6
TC BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_22 33127 34962 + 8.A.59.2.1
TF BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_23 34963 36570 + HTH_AraC
TC BackhedF_2015_ERR525690_bin.1_k119_849 BackhedF_2015_ERR525690_bin.1_k119_849_24 36585 37838 + 3.A.1.1.28
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_9
Type: CAZyme
Location: 8229 - 9890 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_10
Type: TF
Location: 10201 - 11226 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_11
Type: pfam
Location: 11286 - 11987 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_12
Type: TC
Location: 12084 - 12935 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_13
Type:
Location: 13077 - 13739 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_14
Type: CAZyme
Location: 13938 - 23366 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_15
Type:
Location: 23774 - 24160 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_16
Type: pfam
Location: 24366 - 25187 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_17
Type: CAZyme
Location: 25285 - 26955 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_18
Type: TC
Location: 27013 - 27852 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_19
Type: TC
Location: 27849 - 29216 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_20
Type: TC
Location: 29327 - 30604 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_21
Type: pfam
Location: 30896 - 32482 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_22
Type: TC
Location: 33127 - 34962 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_23
Type: TF
Location: 34963 - 36570 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_849_24
Type: TC
Location: 36585 - 37838 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
BackhedF_2015_ERR525690_bin.1_k119_849_21 vegetarian > vegan 1.00870 0.03181

🧭 Explore Read Mapping of CGC

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