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Cluster: BackhedF_2015_ERR525690_bin.1_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525690_bin.1_k119_261 BackhedF_2015_ERR525690_bin.1_k119_261_35 40036 41820 + 8.A.59.2.1
TF BackhedF_2015_ERR525690_bin.1_k119_261 BackhedF_2015_ERR525690_bin.1_k119_261_36 41836 43449 + HTH_AraC | HTH_AraC
TC BackhedF_2015_ERR525690_bin.1_k119_261 BackhedF_2015_ERR525690_bin.1_k119_261_37 43627 44958 + 3.A.1.1.7
TC BackhedF_2015_ERR525690_bin.1_k119_261 BackhedF_2015_ERR525690_bin.1_k119_261_38 45065 45964 + 3.A.1.1.11
TC BackhedF_2015_ERR525690_bin.1_k119_261 BackhedF_2015_ERR525690_bin.1_k119_261_39 45978 46805 + 3.A.1.1.36
CAZyme BackhedF_2015_ERR525690_bin.1_k119_261 BackhedF_2015_ERR525690_bin.1_k119_261_40 46862 48040 + GH88
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_261_35
Type: TC
Location: 40036 - 41820 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_261_36
Type: TF
Location: 41836 - 43449 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_261_37
Type: TC
Location: 43627 - 44958 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_261_38
Type: TC
Location: 45065 - 45964 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_261_39
Type: TC
Location: 45978 - 46805 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_261_40
Type: CAZyme
Location: 46862 - 48040 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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