Cluster: BackhedF_2015_ERR525690_bin.1_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_01201
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_770 | BackhedF_2015_ERR525690_bin.1_k119_770_8 | 8071 | 9876 | - | 8.A.59.2.1 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_770 | BackhedF_2015_ERR525690_bin.1_k119_770_9 | 10219 | 11619 | + | SBP_bac_1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_770 | BackhedF_2015_ERR525690_bin.1_k119_770_10 | 11919 | 12791 | + | 3.A.1.1.28 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_770 | BackhedF_2015_ERR525690_bin.1_k119_770_11 | 12788 | 13612 | + | 3.A.1.1.28 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_770 | BackhedF_2015_ERR525690_bin.1_k119_770_12 | 13644 | 14978 | + | GH29 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_770 | BackhedF_2015_ERR525690_bin.1_k119_770_13 | 15092 | 20497 | + | GH146 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_770 | BackhedF_2015_ERR525690_bin.1_k119_770_14 | 20617 | 23703 | + | GH146 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_770 | BackhedF_2015_ERR525690_bin.1_k119_770_15 | 23700 | 25511 | + | 8.A.59.2.1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_770_8
Type: TC
Location: 8071 - 9876 (-)
Type: TC
Location: 8071 - 9876 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_770_9
Type: STP
Location: 10219 - 11619 (+)
Type: STP
Location: 10219 - 11619 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_770_10
Type: TC
Location: 11919 - 12791 (+)
Type: TC
Location: 11919 - 12791 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_770_11
Type: TC
Location: 12788 - 13612 (+)
Type: TC
Location: 12788 - 13612 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_770_12
Type: CAZyme
Location: 13644 - 14978 (+)
Type: CAZyme
Location: 13644 - 14978 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_770_13
Type: CAZyme
Location: 15092 - 20497 (+)
Type: CAZyme
Location: 15092 - 20497 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_770_14
Type: CAZyme
Location: 20617 - 23703 (+)
Type: CAZyme
Location: 20617 - 23703 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_770_15
Type: TC
Location: 23700 - 25511 (+)
Type: TC
Location: 23700 - 25511 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.