Cluster: BackhedF_2015_ERR525690_bin.1_CGC161
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_01406
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_5123 | BackhedF_2015_ERR525690_bin.1_k119_5123_232 | 250772 | 252196 | - | GH32 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_5123 | BackhedF_2015_ERR525690_bin.1_k119_5123_233 | 252281 | 253972 | - | 3.A.1.1.9 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_5123 | BackhedF_2015_ERR525690_bin.1_k119_5123_234 | 254018 | 254914 | - | 3.A.1.1.9 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_5123 | BackhedF_2015_ERR525690_bin.1_k119_5123_235 | 254938 | 255861 | - | 3.A.1.1.9 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_5123_232
Type: CAZyme
Location: 250772 - 252196 (-)
Type: CAZyme
Location: 250772 - 252196 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_5123_233
Type: TC
Location: 252281 - 253972 (-)
Type: TC
Location: 252281 - 253972 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_5123_234
Type: TC
Location: 254018 - 254914 (-)
Type: TC
Location: 254018 - 254914 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_5123_235
Type: TC
Location: 254938 - 255861 (-)
Type: TC
Location: 254938 - 255861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.