Cluster: BackhedF_2015_ERR525690_bin.1_CGC160
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_00262
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_5123 | BackhedF_2015_ERR525690_bin.1_k119_5123_172 | 182915 | 184813 | - | GH13_11 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_5123 | BackhedF_2015_ERR525690_bin.1_k119_5123_173 | 184816 | 186618 | - | 3.A.1.120.6 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_5123 | BackhedF_2015_ERR525690_bin.1_k119_5123_174 | 186634 | 187389 | - | Exo_endo_phos |
| TC | BackhedF_2015_ERR525690_bin.1_k119_5123 | BackhedF_2015_ERR525690_bin.1_k119_5123_175 | 187654 | 188913 | + | 2.A.49.9.2 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_5123_172
Type: CAZyme
Location: 182915 - 184813 (-)
Type: CAZyme
Location: 182915 - 184813 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_5123_173
Type: TC
Location: 184816 - 186618 (-)
Type: TC
Location: 184816 - 186618 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_5123_174
Type: pfam
Location: 186634 - 187389 (-)
Type: pfam
Location: 186634 - 187389 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_5123_175
Type: TC
Location: 187654 - 188913 (+)
Type: TC
Location: 187654 - 188913 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.