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Cluster: BackhedF_2015_ERR525690_bin.1_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_27 27167 28705 + 3.A.1.12.8
TC BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_28 28720 29451 + 3.A.1.12.8
pfam BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_29 29455 30111 - Hydrolase | Hydrolase_like | HAD_2
peptidase BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_30 30355 31701 + S11.UPW
TC BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_31 31709 33544 - 3.A.1.135.6
TC BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_32 33537 35300 - 3.A.1.135.6
TF BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_33 35569 36171 - 0040517
CAZyme BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_34 36601 39039 - GH95
STP BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_35 39148 40845 - SBP_bac_1
TC BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_36 40932 41822 - 3.A.1.1.29
TC BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_37 41834 42772 - 3.A.1.1.29
TC BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_38 43052 44800 + 9.B.33.1.1
TF BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_39 44781 45554 + HTH_AraC
CAZyme BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_40 45681 47828 - GH42
TF BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_41 47881 49410 - HTH_AraC | HTH_AraC
pfam BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_42 49407 51221 - His_kinase
TC BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_43 51292 52122 - 3.A.1.1.42
TC BackhedF_2015_ERR525690_bin.1_k119_673 BackhedF_2015_ERR525690_bin.1_k119_673_44 52122 53009 - 3.A.1.1.20
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_27
Type: TC
Location: 27167 - 28705 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_28
Type: TC
Location: 28720 - 29451 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_29
Type: pfam
Location: 29455 - 30111 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_30
Type: peptidase
Location: 30355 - 31701 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_31
Type: TC
Location: 31709 - 33544 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_32
Type: TC
Location: 33537 - 35300 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_33
Type: TF
Location: 35569 - 36171 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_34
Type: CAZyme
Location: 36601 - 39039 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_35
Type: STP
Location: 39148 - 40845 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_36
Type: TC
Location: 40932 - 41822 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_37
Type: TC
Location: 41834 - 42772 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_38
Type: TC
Location: 43052 - 44800 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_39
Type: TF
Location: 44781 - 45554 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_40
Type: CAZyme
Location: 45681 - 47828 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_41
Type: TF
Location: 47881 - 49410 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_42
Type: pfam
Location: 49407 - 51221 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_43
Type: TC
Location: 51292 - 52122 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_673_44
Type: TC
Location: 52122 - 53009 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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