Cluster: BackhedF_2015_ERR525690_bin.1_CGC154
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_02382
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_136 | 151805 | 154045 | - | GH3 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_137 | 154101 | 155690 | - | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_138 | 155745 | 157646 | - | 9.B.33.1.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_139 | 157661 | 158563 | - | 3.A.1.1.29 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_140 | 158724 | 159647 | - | 3.A.1.1.10 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_141 | 159730 | 161265 | - | DUF3502 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_142 | 161469 | 166562 | - | CBM66 | GH127 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_136
Type: CAZyme
Location: 151805 - 154045 (-)
Type: CAZyme
Location: 151805 - 154045 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_137
Type: TF
Location: 154101 - 155690 (-)
Type: TF
Location: 154101 - 155690 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_138
Type: TC
Location: 155745 - 157646 (-)
Type: TC
Location: 155745 - 157646 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_139
Type: TC
Location: 157661 - 158563 (-)
Type: TC
Location: 157661 - 158563 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_140
Type: TC
Location: 158724 - 159647 (-)
Type: TC
Location: 158724 - 159647 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_141
Type: pfam
Location: 159730 - 161265 (-)
Type: pfam
Location: 159730 - 161265 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_142
Type: CAZyme
Location: 161469 - 166562 (-)
Type: CAZyme
Location: 161469 - 166562 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.