Cluster: BackhedF_2015_ERR525690_bin.1_CGC153
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_02593
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_103 | 114806 | 115432 | - | 9.B.28.1.8 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_104 | 115516 | 117510 | - | GH31_4 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_105 | 117559 | 118428 | - | 3.A.1.1.6 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_106 | 118430 | 119323 | - | 3.A.1.1.41 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_107 | 119425 | 120819 | - | SBP_bac_1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_108 | 120969 | 121709 | - | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_109 | 121684 | 123540 | - | 8.A.59.2.1 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_110 | 123934 | 125031 | - | Radical_SAM |
| STP | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_111 | 125184 | 126092 | - | PfkB |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4825 | BackhedF_2015_ERR525690_bin.1_k119_4825_112 | 126094 | 127476 | - | GH4 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_103
Type: TC
Location: 114806 - 115432 (-)
Type: TC
Location: 114806 - 115432 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_104
Type: CAZyme
Location: 115516 - 117510 (-)
Type: CAZyme
Location: 115516 - 117510 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_105
Type: TC
Location: 117559 - 118428 (-)
Type: TC
Location: 117559 - 118428 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_106
Type: TC
Location: 118430 - 119323 (-)
Type: TC
Location: 118430 - 119323 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_107
Type: STP
Location: 119425 - 120819 (-)
Type: STP
Location: 119425 - 120819 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_108
Type: TF
Location: 120969 - 121709 (-)
Type: TF
Location: 120969 - 121709 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_109
Type: TC
Location: 121684 - 123540 (-)
Type: TC
Location: 121684 - 123540 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_110
Type: pfam
Location: 123934 - 125031 (-)
Type: pfam
Location: 123934 - 125031 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_111
Type: STP
Location: 125184 - 126092 (-)
Type: STP
Location: 125184 - 126092 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4825_112
Type: CAZyme
Location: 126094 - 127476 (-)
Type: CAZyme
Location: 126094 - 127476 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.