dbCAN HGM

Cluster: BackhedF_2015_ERR525690_bin.1_CGC148

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	BackhedF_2015_ERR525690_bin.1_k119_4565	BackhedF_2015_ERR525690_bin.1_k119_4565_1	309	5024	-	CBM32 \| CBM32 \| CBM32 \| GH140
STP	BackhedF_2015_ERR525690_bin.1_k119_4565	BackhedF_2015_ERR525690_bin.1_k119_4565_2	5150	6526	-	SBP_bac_1
TF	BackhedF_2015_ERR525690_bin.1_k119_4565	BackhedF_2015_ERR525690_bin.1_k119_4565_3	6710	8305	-	HTH_AraC \| HTH_AraC
TC	BackhedF_2015_ERR525690_bin.1_k119_4565	BackhedF_2015_ERR525690_bin.1_k119_4565_4	8286	10073	-	8.A.59.2.1
pfam	BackhedF_2015_ERR525690_bin.1_k119_4565	BackhedF_2015_ERR525690_bin.1_k119_4565_5	10349	11200	+	YitT_membrane \| DUF2179
CAZyme	BackhedF_2015_ERR525690_bin.1_k119_4565	BackhedF_2015_ERR525690_bin.1_k119_4565_6	11301	16223	-	CBM35 \| CBM66 \| GH43_26 \| GH43_31

Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4565_1
Type: CAZyme
Location: 309 - 5024 (-)

Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4565_2
Type: STP
Location: 5150 - 6526 (-)

Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4565_3
Type: TF
Location: 6710 - 8305 (-)

Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4565_4
Type: TC
Location: 8286 - 10073 (-)

Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4565_5
Type: pfam
Location: 10349 - 11200 (+)

Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4565_6
Type: CAZyme
Location: 11301 - 16223 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.