Cluster: BackhedF_2015_ERR525690_bin.1_CGC146
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4528 | BackhedF_2015_ERR525690_bin.1_k119_4528_8 | 10401 | 13544 | - | GH106 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4528 | BackhedF_2015_ERR525690_bin.1_k119_4528_9 | 13541 | 14941 | - | GH4 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4528 | BackhedF_2015_ERR525690_bin.1_k119_4528_10 | 15049 | 16425 | - | 3.A.1.1.46 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4528 | BackhedF_2015_ERR525690_bin.1_k119_4528_11 | 16467 | 17300 | - | 3.A.1.1.48 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4528 | BackhedF_2015_ERR525690_bin.1_k119_4528_12 | 17304 | 18197 | - | 3.A.1.1.7 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4528 | BackhedF_2015_ERR525690_bin.1_k119_4528_13 | 18573 | 20405 | + | 9.B.33.1.1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_4528 | BackhedF_2015_ERR525690_bin.1_k119_4528_14 | 20380 | 21570 | + | HTH_AraC |
| STP | BackhedF_2015_ERR525690_bin.1_k119_4528 | BackhedF_2015_ERR525690_bin.1_k119_4528_15 | 21563 | 22642 | - | AraC_binding | HTH_18 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4528 | BackhedF_2015_ERR525690_bin.1_k119_4528_16 | 22978 | 25467 | + | GH2 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4528_8
Type: CAZyme
Location: 10401 - 13544 (-)
Type: CAZyme
Location: 10401 - 13544 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4528_9
Type: CAZyme
Location: 13541 - 14941 (-)
Type: CAZyme
Location: 13541 - 14941 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4528_10
Type: TC
Location: 15049 - 16425 (-)
Type: TC
Location: 15049 - 16425 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4528_11
Type: TC
Location: 16467 - 17300 (-)
Type: TC
Location: 16467 - 17300 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4528_12
Type: TC
Location: 17304 - 18197 (-)
Type: TC
Location: 17304 - 18197 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4528_13
Type: TC
Location: 18573 - 20405 (+)
Type: TC
Location: 18573 - 20405 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4528_14
Type: TF
Location: 20380 - 21570 (+)
Type: TF
Location: 20380 - 21570 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4528_15
Type: STP
Location: 21563 - 22642 (-)
Type: STP
Location: 21563 - 22642 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4528_16
Type: CAZyme
Location: 22978 - 25467 (+)
Type: CAZyme
Location: 22978 - 25467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.