Cluster: BackhedF_2015_ERR525690_bin.1_CGC143
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_06489
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_50 | 93723 | 95720 | - | GH13_4 |
| NULL(UNKNOWN) | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_51 | 95701 | 95838 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_52 | 96086 | 97363 | - | GH175 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_53 | 97412 | 98254 | - | 3.A.1.1.18 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_54 | 98251 | 99153 | - | 3.A.1.1.37 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_55 | 99324 | 100709 | - | SBP_bac_1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_56 | 100898 | 101986 | - | HTH_AraC | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_57 | 101964 | 103712 | - | 8.A.59.2.1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_58 | 104096 | 105454 | - | 2.A.40.2.1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_50
Type: CAZyme
Location: 93723 - 95720 (-)
Type: CAZyme
Location: 93723 - 95720 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_51
Type:
Location: 95701 - 95838 (-)
Type:
Location: 95701 - 95838 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_52
Type: CAZyme
Location: 96086 - 97363 (-)
Type: CAZyme
Location: 96086 - 97363 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_53
Type: TC
Location: 97412 - 98254 (-)
Type: TC
Location: 97412 - 98254 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_54
Type: TC
Location: 98251 - 99153 (-)
Type: TC
Location: 98251 - 99153 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_55
Type: STP
Location: 99324 - 100709 (-)
Type: STP
Location: 99324 - 100709 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_56
Type: TF
Location: 100898 - 101986 (-)
Type: TF
Location: 100898 - 101986 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_57
Type: TC
Location: 101964 - 103712 (-)
Type: TC
Location: 101964 - 103712 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_58
Type: TC
Location: 104096 - 105454 (-)
Type: TC
Location: 104096 - 105454 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.