Cluster: BackhedF_2015_ERR525690_bin.1_CGC141
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_02636
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_16 | 27579 | 29336 | - | 8.A.59.2.1 |
| pfam | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_17 | 29366 | 29983 | - | Hexapep | Mac | Hexapep_2 |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_18 | 30245 | 36787 | - | CBM66 | CBM66 | GH2 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_19 | 36955 | 38853 | - | 3.A.1.135.5 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_20 | 38831 | 40597 | - | 3.A.1.135.5 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_21 | 40767 | 41204 | - | MarR |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_22 | 41398 | 47934 | - | CBM35 | CBM6 | GH31 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_23 | 48116 | 49312 | - | 3.A.1.2.5 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_24 | 49325 | 50857 | - | 3.A.1.2.5 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_25 | 50955 | 52202 | - | 3.A.1.2.22 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_26 | 52792 | 53826 | - | 3.A.1.2.4 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_27 | 53816 | 55132 | - | HTH_AraC | HTH_AraC |
| TC | BackhedF_2015_ERR525690_bin.1_k119_4471 | BackhedF_2015_ERR525690_bin.1_k119_4471_28 | 55160 | 56635 | - | 8.A.59.2.1 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_16
Type: TC
Location: 27579 - 29336 (-)
Type: TC
Location: 27579 - 29336 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_17
Type: pfam
Location: 29366 - 29983 (-)
Type: pfam
Location: 29366 - 29983 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_18
Type: CAZyme
Location: 30245 - 36787 (-)
Type: CAZyme
Location: 30245 - 36787 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_19
Type: TC
Location: 36955 - 38853 (-)
Type: TC
Location: 36955 - 38853 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_20
Type: TC
Location: 38831 - 40597 (-)
Type: TC
Location: 38831 - 40597 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_21
Type: TF
Location: 40767 - 41204 (-)
Type: TF
Location: 40767 - 41204 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_22
Type: CAZyme
Location: 41398 - 47934 (-)
Type: CAZyme
Location: 41398 - 47934 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_23
Type: TC
Location: 48116 - 49312 (-)
Type: TC
Location: 48116 - 49312 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_24
Type: TC
Location: 49325 - 50857 (-)
Type: TC
Location: 49325 - 50857 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_25
Type: TC
Location: 50955 - 52202 (-)
Type: TC
Location: 50955 - 52202 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_26
Type: TC
Location: 52792 - 53826 (-)
Type: TC
Location: 52792 - 53826 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_27
Type: TF
Location: 53816 - 55132 (-)
Type: TF
Location: 53816 - 55132 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_28
Type: TC
Location: 55160 - 56635 (-)
Type: TC
Location: 55160 - 56635 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.