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Cluster: BackhedF_2015_ERR525690_bin.1_CGC140

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC BackhedF_2015_ERR525690_bin.1_k119_4471 BackhedF_2015_ERR525690_bin.1_k119_4471_3 1756 2280 - 9.B.156.3.1
STP BackhedF_2015_ERR525690_bin.1_k119_4471 BackhedF_2015_ERR525690_bin.1_k119_4471_4 2336 3643 - GGDEF
TC BackhedF_2015_ERR525690_bin.1_k119_4471 BackhedF_2015_ERR525690_bin.1_k119_4471_5 3775 4620 - 3.A.1.1.18
TC BackhedF_2015_ERR525690_bin.1_k119_4471 BackhedF_2015_ERR525690_bin.1_k119_4471_6 4622 5542 - 3.A.1.1.4
STP BackhedF_2015_ERR525690_bin.1_k119_4471 BackhedF_2015_ERR525690_bin.1_k119_4471_7 5645 7072 - SBP_bac_1
CAZyme BackhedF_2015_ERR525690_bin.1_k119_4471 BackhedF_2015_ERR525690_bin.1_k119_4471_8 7207 14976 - CBM32 | CBM57 | GH136
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_3
Type: TC
Location: 1756 - 2280 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_4
Type: STP
Location: 2336 - 3643 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_5
Type: TC
Location: 3775 - 4620 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_6
Type: TC
Location: 4622 - 5542 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_7
Type: STP
Location: 5645 - 7072 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4471_8
Type: CAZyme
Location: 7207 - 14976 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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