Cluster: BackhedF_2015_ERR525690_bin.1_CGC14
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: BackhedF_2015_ERR525690_bin.1
- CGC Family ID: CGCFAM_04984
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | BackhedF_2015_ERR525690_bin.1_k119_507 | BackhedF_2015_ERR525690_bin.1_k119_507_49 | 50838 | 51530 | + | 2.A.122.1.4 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_507 | BackhedF_2015_ERR525690_bin.1_k119_507_50 | 51571 | 52416 | + | NUDIX |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_507 | BackhedF_2015_ERR525690_bin.1_k119_507_51 | 52666 | 53970 | + | GH16_3 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_507 | BackhedF_2015_ERR525690_bin.1_k119_507_52 | 54073 | 55446 | + | SBP_bac_1 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_507 | BackhedF_2015_ERR525690_bin.1_k119_507_53 | 55499 | 56389 | + | 3.A.1.1.42 |
| TC | BackhedF_2015_ERR525690_bin.1_k119_507 | BackhedF_2015_ERR525690_bin.1_k119_507_54 | 56389 | 57210 | + | 3.A.1.1.45 |
| STP | BackhedF_2015_ERR525690_bin.1_k119_507 | BackhedF_2015_ERR525690_bin.1_k119_507_55 | 57396 | 59174 | + | dCache_1 |
| TF | BackhedF_2015_ERR525690_bin.1_k119_507 | BackhedF_2015_ERR525690_bin.1_k119_507_56 | 59146 | 60651 | + | HTH_AraC |
| CAZyme | BackhedF_2015_ERR525690_bin.1_k119_507 | BackhedF_2015_ERR525690_bin.1_k119_507_57 | 60648 | 62582 | + | GH20 |
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_49
Type: TC
Location: 50838 - 51530 (+)
Type: TC
Location: 50838 - 51530 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_50
Type: STP
Location: 51571 - 52416 (+)
Type: STP
Location: 51571 - 52416 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_51
Type: CAZyme
Location: 52666 - 53970 (+)
Type: CAZyme
Location: 52666 - 53970 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_52
Type: STP
Location: 54073 - 55446 (+)
Type: STP
Location: 54073 - 55446 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_53
Type: TC
Location: 55499 - 56389 (+)
Type: TC
Location: 55499 - 56389 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_54
Type: TC
Location: 56389 - 57210 (+)
Type: TC
Location: 56389 - 57210 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_55
Type: STP
Location: 57396 - 59174 (+)
Type: STP
Location: 57396 - 59174 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_56
Type: TF
Location: 59146 - 60651 (+)
Type: TF
Location: 59146 - 60651 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_507_57
Type: CAZyme
Location: 60648 - 62582 (+)
Type: CAZyme
Location: 60648 - 62582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Robinsoniella
Species
Robinsoniella sp900540475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.