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Cluster: BackhedF_2015_ERR525690_bin.1_CGC138

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_28 38170 39420 - CBM6 | GH43_2
TF BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_29 39766 40776 + LacI
STP BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_30 40977 42662 + SBP_bac_1
TC BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_31 42812 43687 + 3.A.1.1.7
TC BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_32 43689 44525 + 3.A.1.1.41
NULL(UNKNOWN) BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_33 44558 45850 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_34 46004 47728 + GH78
CAZyme BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_35 47771 50209 + GH2
CAZyme BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_36 50367 51902 - CBM91 | GH43_12
TF BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_37 52112 53122 + LacI
CAZyme BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_38 53379 56471 + GH106
CAZyme BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_39 56680 59175 + GH78
TF BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_40 59189 60085 - HTH_AraC
pfam BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_41 60298 61686 + MatE | MatE
TC BackhedF_2015_ERR525690_bin.1_k119_4386 BackhedF_2015_ERR525690_bin.1_k119_4386_42 61869 62720 + 3.A.1.149.1
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_28
Type: CAZyme
Location: 38170 - 39420 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_29
Type: TF
Location: 39766 - 40776 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_30
Type: STP
Location: 40977 - 42662 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_31
Type: TC
Location: 42812 - 43687 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_32
Type: TC
Location: 43689 - 44525 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_33
Type:
Location: 44558 - 45850 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_34
Type: CAZyme
Location: 46004 - 47728 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_35
Type: CAZyme
Location: 47771 - 50209 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_36
Type: CAZyme
Location: 50367 - 51902 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_37
Type: TF
Location: 52112 - 53122 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_38
Type: CAZyme
Location: 53379 - 56471 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_39
Type: CAZyme
Location: 56680 - 59175 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_40
Type: TF
Location: 59189 - 60085 (-)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_41
Type: pfam
Location: 60298 - 61686 (+)
Gene ID: BackhedF_2015_ERR525690_bin.1_k119_4386_42
Type: TC
Location: 61869 - 62720 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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